Banner Banner

Gabriel Dernbach

Icon

Technische Universität Berlin
Explainable Machine Learning in Medicine

Invalidenstraße 120, 10115 Berlin

Gabriel Dernbach

Doctoral Researcher

Research project: “Linking Tissue Morphologies to Driver Mutations in Non-small-cell Lung Cancer”

Marvin Sextro, Weronika Kłos, Gabriel Dernbach

MapPFN: Learning Causal Perturbation Maps in Context

January 28, 2026
https://doi.org/10.48550/arXiv.2601.21092

Maximilian Alber, Timo Milbich, Alexandra Carpen-Amarie, Stephan Tietz, Jonas Dippel, Lukas Muttenthaler, Beatriz Perez Cancer, Alessandro Benetti, Panos Korfiatis, Elias Eulig, Jérôme Lüscher, Jiasen Wu, Sayed Abid Hashimi, Gabriel Dernbach, Simon Schallenberg, Neelay Shah, Moritz Krügener, Aniruddh Jammoria, Jake Matras, Patrick Duffy, Matt Redlon, Philipp Jurmeister, David Horst, Lukas Ruff, Klaus-Robert Müller, Frederick Klauschen, Andrew Norgan

Atlas 2 - Foundation models for clinical deployment

January 08, 2026
https://doi.org/10.48550/arXiv.2601.05148

Nadia Jurczok, Gabriel Dernbach, Benedikt Ebner, Henning Plage, Mihnea P. Dragomir, Philipp Keyl, Julika Ribbat-Idel, Evelyn Ramberger, Florian Roßner, Alexander Quaas, Guido Sauter, Thorsten Schlomm, Frederick Klauschen, Christian Stief, David Horst, Gerald Bastian Schulz, Marie-Lisa Eich, Simon Schallenberg

Multiregional Immune Profiling Reveals Prognostic Patterns in Bladder Cancer

December 30, 2025
https://doi.org/10.1016/j.euo.2025.12.006

Tancredi Massimo Pentimalli, Simon Schallenberg, Daniel León-Periñán, Ivano Legnini, Ilan Theurillat, Gwendolin Thomas, Anastasiya Boltengagen, Sonja Fritzsche, Jose Nimo, Lukas Ruff, Gabriel Dernbach, Philipp Jurmeister, Sarah Murphy, Mark T. Gregory, Yan Liang, Michelangelo Cordenonsi, Stefano Piccolo, Fabian Coscia, Andrew Woehler, Nikos Karaiskos, Frederick Klauschen, Nikolaus Rajewsky

Combining spatial transcriptomics and ECM imaging in 3D for mapping cellular interactions in the tumor microenvironment

May 21, 2025
https://www.cell.com/cell-systems/fulltext/S2405-4712(25)00094-8

Gabriel Dernbach, Marie-Lisa Eich, Mihnea P. Dragomir, Philipp Anders, Nadia Jurczok, Christian Stief, Philipp Jurmeister, Thorsten Schlomm, Frederick Klauschen, David Horst, Gerald Bastian Schulz, Simon Schallenberg

Spatial expression of HER2, NECTIN4, and TROP-2 in Muscle-Invasive Bladder Cancer and metastases: Implications for pathological and clinical management

March 12, 2025
https://www.sciencedirect.com/science/article/pii/S0893395225000493

News
Machine Learning| Nov 14, 2025

AI Improves Lung Cancer Diagnostics

An interdisciplinary research team from BIFOLD (Berlin Institute for the Foundations of Learning and Data), Technische Universität Berlin, Universitätsklinikum Köln, Charité - Universitätsmedizin Berlin, the AI company Aignostics, and Ludwig Maximilians University Munich (LMU) has developed a novel AI-based method to more accurately predict the survival of lung cancer patients.