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Gabriel Dernbach

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Technische Universität Berlin
Explainable Machine Learning in Medicine

Invalidenstraße 120, 10115 Berlin

Gabriel Dernbach

Doctoral Researcher

Research project: “Linking Tissue Morphologies to Driver Mutations in Non-small-cell Lung Cancer”

Tancredi Massimo Pentimalli, Simon Schallenberg, Daniel León-Periñán, Ivano Legnini, Ilan Theurillat, Gwendolin Thomas, Anastasiya Boltengagen, Sonja Fritzsche, Jose Nimo, Lukas Ruff, Gabriel Dernbach, Philipp Jurmeister, Sarah Murphy, Mark T. Gregory, Yan Liang, Michelangelo Cordenonsi, Stefano Piccolo, Fabian Coscia, Andrew Woehler, Nikos Karaiskos, Frederick Klauschen, Nikolaus Rajewsky

Combining spatial transcriptomics and ECM imaging in 3D for mapping cellular interactions in the tumor microenvironment

May 21, 2025
https://www.cell.com/cell-systems/fulltext/S2405-4712(25)00094-8

Gabriel Dernbach, Marie-Lisa Eich, Mihnea P. Dragomir, Philipp Anders, Nadia Jurczok, Christian Stief, Philipp Jurmeister, Thorsten Schlomm, Frederick Klauschen, David Horst, Gerald Bastian Schulz, Simon Schallenberg

Spatial expression of HER2, NECTIN4, and TROP-2 in Muscle-Invasive Bladder Cancer and metastases: Implications for pathological and clinical management

March 12, 2025
https://www.sciencedirect.com/science/article/pii/S0893395225000493

Maximilian Alber, Stephan Tietz, Jonas Dippel, Timo Milbich, Timothée Lesort, Panos Korfiatis, Moritz Krügener, Beatriz Perez Cancer, Neelay Shah, Alexander Möllers, Philipp Seegerer, Alexandra Carpen-Amarie, Kai Standvoss, Gabriel Dernbach, Edwin de Jong, Simon Schallenberg, Andreas Kunft, Helmut Hoffer von Ankershoffen, Gavin Schaeferle, Patrick Duffy, Matt Redlon, Philipp Jurmeister, David Horst, Lukas Ruff, Klaus-Robert Müller, Frederick Klauschen, Andrew Norgan

Atlas: A Novel Pathology Foundation Model by Mayo Clinic, Charité, and Aignostics

January 10, 2025
https://doi.org/10.48550/arXiv.2501.05409

Marvin Sextro, Gabriel Dernbach, Kai Standvoss, Simon Schallenberg, Frederick Klauschen, Klaus-Robert Müller, Maximilian Alber, Lukas Ruff

xCG: Explainable Cell Graphs for Survival Prediction in Non-Small Cell Lung Cancer

November 12, 2024
https://ui.adsabs.harvard.edu/link_gateway/2024arXiv241107643S/doi:10.48550/arXiv.2411.07643

Gabriel Dernbach, Daniel Kazdal, Lukas Ruff, Maximilian Alber, Eva Romanovsky, Simon Schallenberg, Petros Christopoulos, Cleo-Aron Weis, Thomas Muley, Marc A. Schneider, Peter Schirmacher, Michael Thomas, Klaus-Robert Müller, Jan Budczies, Albrecht Stenzinger, Frederick Klauschen

Dissecting AI-based mutation prediction in lung adenocarcinoma: A comprehensive real-world study

September 14, 2024
https://doi.org/10.1016/j.ejca.2024.114292