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Surface-based image reconstruction optimization for high-density functional near-infrared spectroscopy

Laura B. Carlton
Miray Altınkaynak
Shannon Kelley
Bernhard B. Zimmermann
Sreekanth Kura
Eike Middell
Alexander von Lühmann
Emily P. Stephen
Meryem A. Yücel
David A. Boas

March 14, 2026

Significance

Diffuse optical tomography (DOT) enables mapping of functional near-infrared spectroscopy channel-based optical density changes to spatial images of oxy- and deoxyhemoglobin. Accurate reconstruction requires optimization for specific probe geometries. Although prior work focused on volumetric voxel reconstructions with grid arrays, here we examine high-density hexagonal arrays for surface-based reconstructions of the brain and scalp.

Aim

We evaluate measurement and spatial regularization, spatial basis functions, and reconstruction strategies to reduce crosstalk and improve localization. Both single-wavelength (indirect) and dual-wavelength (direct) approaches are compared.

Approach

Simulations with a white-noise model guided parameter optimization using image quality metrics. Resting-state data were augmented with synthetic hemodynamic response functions (HRFs) to incorporate real measurement variance into the parameter optimization pipeline, and results were validated with a ball-squeezing motor task.

Results

Gaussian spatial bases reduced brain–scalp crosstalk but lowered contrast-to-noise ratio and increased localization error. Indirect hemoglobin reconstruction decreased oxy–deoxy crosstalk. Validation data showed strong, lateralized motor cortex activation contralateral to the active hand.

Conclusions

High-density hexagonal arrays enable accurate surface DOT reconstructions when optimized. Resting-state data augmented with synthetic HRFs provide an effective strategy for parameter selection, yielding localized activation with a high contrast-to-noise ratio.